Analysis of Orthologous SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1) Promotor Activity in Herbaceous and Woody Angiosperms.
Identifieur interne : 000B34 ( Main/Exploration ); précédent : 000B33; suivant : 000B35Analysis of Orthologous SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1) Promotor Activity in Herbaceous and Woody Angiosperms.
Auteurs : Libert B. Tonfack [Cameroun] ; Steven G. Hussey [Afrique du Sud] ; Adri Veale [Afrique du Sud] ; Alexander A. Myburg [Afrique du Sud] ; Eshchar Mizrachi [Afrique du Sud]Source :
- International journal of molecular sciences [ 1422-0067 ] ; 2019.
Descripteurs français
- KwdFr :
- Arabidopsis (génétique), Arabidopsis (ultrastructure), Eucalyptus (génétique), Eucalyptus (ultrastructure), Facteurs de transcription (génétique), Phylogenèse (MeSH), Populus (génétique), Populus (ultrastructure), Protéines d'Arabidopsis (génétique), Protéines végétales (génétique), Régions promotrices (génétique) (MeSH), Régulation de l'expression des gènes végétaux (MeSH).
- MESH :
English descriptors
- KwdEn :
- Arabidopsis (genetics), Arabidopsis (ultrastructure), Arabidopsis Proteins (genetics), Eucalyptus (genetics), Eucalyptus (ultrastructure), Gene Expression Regulation, Plant (MeSH), Phylogeny (MeSH), Plant Proteins (genetics), Populus (genetics), Populus (ultrastructure), Promoter Regions, Genetic (MeSH), Transcription Factors (genetics).
- MESH :
- chemical , genetics : Arabidopsis Proteins, Plant Proteins, Transcription Factors.
- genetics : Arabidopsis, Eucalyptus, Populus.
- ultrastructure : Arabidopsis, Eucalyptus, Populus.
- Gene Expression Regulation, Plant, Phylogeny, Promoter Regions, Genetic.
Abstract
SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1) is a master regulator of fibre secondary wall deposition in Arabidopsis thaliana (Arabidopsis), with homologs in other angiosperms and gymnosperms. However, it is poorly understood to what extent the fibre-specific regulation of the SND1 promoter, and that of its orthologs, is conserved between diverged herbaceous and woody lineages. We performed a reciprocal reporter gene analysis of orthologous SND1 promoters from Arabidopsis (AthSND1), Eucalyptus grandis (EgrNAC61) and Populus alba × P. grandidentata (PagWND1A) relative to secondary cell wall-specific Cellulose Synthase4 (CesA4) and CesA7 promoters, in both a non-woody (Arabidopsis) and a woody (poplar) system. β-glucuronidase (GUS) reporter analysis in Arabidopsis showed that the SND1 promoter was active in vascular tissues as previously reported and showed interfascicular and xylary fibre-specific expression in inflorescence stems, while reporter constructs of the woody plant-derived promoters were partial to the (pro)cambium-phloem and protoxylem. In transgenic P. tremula × P. alba plants, all three orthologous SND1 promoters expressed the GUS reporter similarly and preferentially in developing secondary xylem, ray parenchyma and cork cambium. Ours is the first study to reciprocally test orthologous SND1 promoter specificity in herbaceous and woody species, revealing diverged regulatory functions in the herbaceous system.
DOI: 10.3390/ijms20184623
PubMed: 31540430
PubMed Central: PMC6770381
Affiliations:
Links toward previous steps (curation, corpus...)
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Tonfack</name><affiliation wicri:level="1"><nlm:affiliation>Plant Physiology and Improvement Unit, Laboratory of Biotechnology and Environment, Department of Plant Biology, University of Yaoundé I, Yaoundé 0812, Cameroon. btonfack@uy1.uninet.cm.</nlm:affiliation><country xml:lang="fr">Cameroun</country><wicri:regionArea>Plant Physiology and Improvement Unit, Laboratory of Biotechnology and Environment, Department of Plant Biology, University of Yaoundé I, Yaoundé 0812</wicri:regionArea><wicri:noRegion>Yaoundé 0812</wicri:noRegion></affiliation></author><author><name sortKey="Hussey, Steven G" sort="Hussey, Steven G" uniqKey="Hussey S" first="Steven G" last="Hussey">Steven G. Hussey</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. steven.hussey@fabi.up.ac.za.</nlm:affiliation><country xml:lang="fr">Afrique du Sud</country><wicri:regionArea>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002</wicri:regionArea><wicri:noRegion>Pretoria 0002</wicri:noRegion></affiliation></author><author><name sortKey="Veale, Adri" sort="Veale, Adri" uniqKey="Veale A" first="Adri" last="Veale">Adri Veale</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. adri.veale@fabi.up.ac.za.</nlm:affiliation><country xml:lang="fr">Afrique du Sud</country><wicri:regionArea>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002</wicri:regionArea><wicri:noRegion>Pretoria 0002</wicri:noRegion></affiliation></author><author><name sortKey="Myburg, Alexander A" sort="Myburg, Alexander A" uniqKey="Myburg A" first="Alexander A" last="Myburg">Alexander A. 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However, it is poorly understood to what extent the fibre-specific regulation of the <i>SND1</i> promoter, and that of its orthologs, is conserved between diverged herbaceous and woody lineages. We performed a reciprocal reporter gene analysis of orthologous <i>SND1</i> promoters from Arabidopsis (<i>AthSND1</i>), <i>Eucalyptus grandis</i> (<i>EgrNAC61</i>) and <i>Populus alba</i> × <i>P. grandidentata</i> (<i>PagWND1A</i>) relative to secondary cell wall-specific <i>Cellulose Synthase4 (CesA4</i>) and <i>CesA7</i> promoters, in both a non-woody (Arabidopsis) and a woody (poplar) system. β-glucuronidase (GUS) reporter analysis in Arabidopsis showed that the <i>SND1</i> promoter was active in vascular tissues as previously reported and showed interfascicular and xylary fibre-specific expression in inflorescence stems, while reporter constructs of the woody plant-derived promoters were partial to the (pro)cambium-phloem and protoxylem. In transgenic <i>P. tremula</i> × <i>P. alba</i> plants, all three orthologous <i>SND1</i> promoters expressed the GUS reporter similarly and preferentially in developing secondary xylem, ray parenchyma and cork cambium. Ours is the first study to reciprocally test orthologous <i>SND1</i> promoter specificity in herbaceous and woody species, revealing diverged regulatory functions in the herbaceous system.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">31540430</PMID><DateCompleted><Year>2020</Year><Month>02</Month><Day>07</Day></DateCompleted><DateRevised><Year>2020</Year><Month>02</Month><Day>07</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1422-0067</ISSN><JournalIssue CitedMedium="Internet"><Volume>20</Volume><Issue>18</Issue><PubDate><Year>2019</Year><Month>Sep</Month><Day>18</Day></PubDate></JournalIssue><Title>International journal of molecular sciences</Title><ISOAbbreviation>Int J Mol Sci</ISOAbbreviation></Journal><ArticleTitle>Analysis of Orthologous <i>SECONDARY WALL-ASSOCIATED NAC DOMAIN1 (SND1)</i> Promotor Activity in Herbaceous and Woody Angiosperms.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E4623</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/ijms20184623</ELocationID><Abstract><AbstractText><i>SECONDARY WALL-ASSOCIATED NAC DOMAIN1</i> (<i>SND1</i>) is a master regulator of fibre secondary wall deposition in <i>Arabidopsis thaliana</i> (Arabidopsis), with homologs in other angiosperms and gymnosperms. However, it is poorly understood to what extent the fibre-specific regulation of the <i>SND1</i> promoter, and that of its orthologs, is conserved between diverged herbaceous and woody lineages. We performed a reciprocal reporter gene analysis of orthologous <i>SND1</i> promoters from Arabidopsis (<i>AthSND1</i>), <i>Eucalyptus grandis</i> (<i>EgrNAC61</i>) and <i>Populus alba</i> × <i>P. grandidentata</i> (<i>PagWND1A</i>) relative to secondary cell wall-specific <i>Cellulose Synthase4 (CesA4</i>) and <i>CesA7</i> promoters, in both a non-woody (Arabidopsis) and a woody (poplar) system. β-glucuronidase (GUS) reporter analysis in Arabidopsis showed that the <i>SND1</i> promoter was active in vascular tissues as previously reported and showed interfascicular and xylary fibre-specific expression in inflorescence stems, while reporter constructs of the woody plant-derived promoters were partial to the (pro)cambium-phloem and protoxylem. In transgenic <i>P. tremula</i> × <i>P. alba</i> plants, all three orthologous <i>SND1</i> promoters expressed the GUS reporter similarly and preferentially in developing secondary xylem, ray parenchyma and cork cambium. Ours is the first study to reciprocally test orthologous <i>SND1</i> promoter specificity in herbaceous and woody species, revealing diverged regulatory functions in the herbaceous system.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Tonfack</LastName><ForeName>Libert B</ForeName><Initials>LB</Initials><Identifier Source="ORCID">0000-0002-3478-4187</Identifier><AffiliationInfo><Affiliation>Plant Physiology and Improvement Unit, Laboratory of Biotechnology and Environment, Department of Plant Biology, University of Yaoundé I, Yaoundé 0812, Cameroon. btonfack@uy1.uninet.cm.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hussey</LastName><ForeName>Steven G</ForeName><Initials>SG</Initials><Identifier Source="ORCID">0000-0002-1079-8373</Identifier><AffiliationInfo><Affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. steven.hussey@fabi.up.ac.za.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Veale</LastName><ForeName>Adri</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. adri.veale@fabi.up.ac.za.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Myburg</LastName><ForeName>Alexander A</ForeName><Initials>AA</Initials><Identifier Source="ORCID">0000-0003-0644-5003</Identifier><AffiliationInfo><Affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. zander.myburg@fabi.up.ac.za.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mizrachi</LastName><ForeName>Eshchar</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Genomics Research Institute (GRI), University of Pretoria, Pretoria 0002, South Africa. eshchar.mizrachi@fabi.up.ac.za.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>Eucalyptus Genomics strategic grant</GrantID><Agency>Department of Science and Technology, Republic of South Africa</Agency><Country></Country></Grant><Grant><GrantID>UID 97911</GrantID><Agency>National Research Foundation</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>09</Month><Day>18</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Int J Mol Sci</MedlineTA><NlmUniqueID>101092791</NlmUniqueID><ISSNLinking>1422-0067</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D029681">Arabidopsis Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C517318">SND1 protein, Arabidopsis</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014157">Transcription Factors</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000648" MajorTopicYN="N">ultrastructure</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D029681" MajorTopicYN="N">Arabidopsis Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005052" MajorTopicYN="N">Eucalyptus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000648" MajorTopicYN="N">ultrastructure</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000648" MajorTopicYN="N">ultrastructure</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011401" MajorTopicYN="N">Promoter Regions, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014157" MajorTopicYN="N">Transcription Factors</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">SND1</Keyword><Keyword MajorTopicYN="N">secondary cell wall</Keyword><Keyword MajorTopicYN="N">transcriptional regulation</Keyword><Keyword MajorTopicYN="N">vascular evolution</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>06</Month><Day>13</Day></PubMedPubDate><PubMedPubDate 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Tonfack</name></noRegion></country><country name="Afrique du Sud"><noRegion><name sortKey="Hussey, Steven G" sort="Hussey, Steven G" uniqKey="Hussey S" first="Steven G" last="Hussey">Steven G. Hussey</name></noRegion><name sortKey="Mizrachi, Eshchar" sort="Mizrachi, Eshchar" uniqKey="Mizrachi E" first="Eshchar" last="Mizrachi">Eshchar Mizrachi</name><name sortKey="Myburg, Alexander A" sort="Myburg, Alexander A" uniqKey="Myburg A" first="Alexander A" last="Myburg">Alexander A. Myburg</name><name sortKey="Veale, Adri" sort="Veale, Adri" uniqKey="Veale A" first="Adri" last="Veale">Adri Veale</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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